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Silicon Graphics Teaching Laboratory Eadfrith
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If you want to look at a molecule quickly, without starting MacroModel or Cosmic, type eadfrith Filename. You will get the following messages:

 Use ESC key to exit, SPACE to render
 LEFTMOUSE to enlarge,
 MIDDLEMOUSE to rotate, RIGHTMOUSE to move.
 (A) Radii: 1.000000 
 (B) Bond Option: 0
 (C) Picture in window
 (D) Full contrast
 (E) Background colour (RGB): 0 0 0
 (F) New Orientation
 (G) No NMA
 (H) Standard Colours
 (I) No Initial Depth Cue
 (J) Line Width: 1
 (K) Ambient Light 0.5000000 
 (L) Bond radius  0.3000000
 (*) Quit
 Enter a letter, then RETURN, to alter options
 or press RETURN to continue

Press RETURN immediately to display your molecule. It will appear in a new window, and can be rotated, enlarged and moved using the mouse. A rendered version can be made by pressing the space bar. The window can be killed by pressing the ESC key (top left of the keyboard).

To alter the settings, type a letter, then press return. You may then be asked for more information. The options control the picture in the following ways:

  • A: Alter the radius of the rendered spheres (drawn when the space bar is pressed). 1.0 gives a ball and stick model; 4.0 gives a CPK model.
  • B: Controls the colouring of the rendered bonds.
  • C: Toggles between a new window and filling the screen with the molecule.
  • D: Controls the contrast in the rendered picture.
  • E: Controls the colour of the background. 0, 0, 0 gives a black background; 255, 255, 255 give a white background. The first number is the red component of the colour, the second is the green component, the final number is the blue component.
  • F: Decides whether to use the orientation of the previous molecule, or to use a new orientation.
  • G: This option enables you to animate normal mode analyses.
  • H: This switches between using standard colours, or reading them from the file.
  • I: Turns depth cueing on or off while molecules are rotated.
  • J: Determines the width (in pixels) of the lines that make up the molecule.
  • K: This figure is the ratio of ambient to directional light in the rendered figure.

Eadfrith may be downloaded from this server.

Eadfrith illuminated the Lindisfarne Gospels.

Cambridge Chemistry Home Page Silicon Graphics Teaching Laboratory Webmaster
Modified: Sun Dec 22 17:00:00 1996 GMT
Page accessed 6031 times since Sat Apr 17 21:23:54 1999 GMT