From chemistry-request*- at -*server.ccl.net Wed Jun 26 09:24:22 2002 Received: from hermes.csd.unb.ca (root $#at#$ [131.202.3.20]) by server.ccl.net (8.11.6/8.11.0) with ESMTP id g5QDOLW31192 for ; Wed, 26 Jun 2002 09:24:21 -0400 Received: from csd-dd0oht6l3yg (mailserv.unb.ca [131.202.3.23]) by hermes.csd.unb.ca (8.9.3/8.9.3) with SMTP id KAA22543 for ; Wed, 26 Jun 2002 10:24:21 -0300 (ADT) Received: FROM pop.unb.ca BY csd-dd0oht6l3yg ; Wed Jun 26 10:23:52 2002 -0300 Received: from webmail1 (webmail1.unb.ca [131.202.130.26]) by pop.unb.ca (8.9.3/8.9.3) with ESMTP id KAA08144 for ; Wed, 26 Jun 2002 10:24:21 -0300 (ADT) X-WebMail-UserID: l72k6 Date: Wed, 26 Jun 2002 10:24:05 -0300 Sender: Robert Flight From: Robert Flight To: Computational Chemistry List X-EXP32-SerialNo: 00003025, 00003442 Subject: Autodock - Integral Charges? Message-ID: <3D16887C%!at!%webmail1> Mime-Version: 1.0 Content-Type: text/plain; charset="US-ASCII" Content-Transfer-Encoding: 7bit X-Mailer: WebMail (Hydra) SMTP v3.61.08 I just started using autodock, and I'm getting an error message about residues not having integral charges. Does this mean that the charge on each peptide of a receptor has to be an integral value of -1, 0, 1 or something along those lines? As well, does anyone know how to avoid this problem, as it occurs whether I calculate the charges in AutoDockTools or using another program (Molecular Operating Environment - MOE). Any help or suggestions are appreciated. Thanks, Robert Robert Flight Department of Chemistry University of New Brunswick e-mail: L72K6 \\at// unb.ca tel: 506-461-5760