From chemistry-request(+ at +)server.ccl.net Tue Jan 14 18:46:27 2003 Received: from ntsmtp01.usc.edu ([128.125.179.129]) by server.ccl.net (8.11.6/8.11.0) with ESMTP id h0ENkR423738 for ; Tue, 14 Jan 2003 18:46:27 -0500 Received: by NTSMTP01 with Internet Mail Service (5.5.2653.19) id ; Tue, 14 Jan 2003 15:46:27 -0800 Message-ID: <73564B8DE398D61180500008C75D7E494388C1 -A_T- NTMAIL03> From: "Pandey, Jaya" To: "'chemistry.,at,.ccl.net'" Subject: Docking Date: Tue, 14 Jan 2003 15:46:25 -0800 MIME-Version: 1.0 X-Mailer: Internet Mail Service (5.5.2653.19) Content-Type: text/plain Dear All, I used Bigger software for docking my ligand to a homologous structure as the structure currently is not know of my receptor. Can someone guide me as how to calculate the binding energy in order to understand the docking of my ligand. Although I can view my ligand docked to the target but I think it needs to be confirmed by some calculations, please help! Jaya