From chemistry-request[ AT ]ccl.net Fri Nov 28 21:13:44 2003 Received: from GWIA.HSC.WVU.EDU (gateway.hsc.wvu.edu [157.182.105.18]) by server.ccl.net (8.12.8/8.12.8) with ESMTP id hAT2DBNL032340 for ; Fri, 28 Nov 2003 21:13:12 -0500 Received: from HSC-DOM5-MTA by GWIA.HSC.WVU.EDU with Novell_GroupWise; Fri, 28 Nov 2003 21:13:30 -0500 Message-Id: X-Mailer: Novell GroupWise Internet Agent 6.5.1 Date: Fri, 28 Nov 2003 21:12:58 -0500 From: "Peter Gannett" To: , Subject: Re: CCL:AMBER is MM or MD? Mime-Version: 1.0 Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: 7bit Content-Disposition: inline X-Spam-Status: No, hits=0.0 required=7.0 tests=none version=2.55 X-Spam-Checker-Version: SpamAssassin 2.55 (1.174.2.19-2003-05-19-exp) Telkuni: I'm not sure I understand your question entirely, but amber is used for both MM and MD. Pete Gannett >>> "Telkuni" 11/28/03 15:37 PM >>> Hello, CCLers. Although I think it is very basic knowledge, I want to know the truth. Some papers and books treat AMBER as Molecular Mechanic method describing with force fields and bonding parameters. But others treat AMBER as Molecular Dynamic method describing with potential functions. Does AMBER belong MM or MD? and or both of them? >...All responses, I will appreciate. And I will summarize them. Sincerely yours, ---------------------------------------------------- Telkuni Tsuru telkuni(at)venus.dti.ne.jp -= This is automatically added to each message by the mailing script =- To send e-mail to subscribers of CCL put the string CCL: on your Subject: line and send your message to: CHEMISTRY(at)ccl.net Send your subscription/unsubscription requests to: CHEMISTRY-REQUEST(at)ccl.net HOME Page: http://www.ccl.net | Jobs Page: http://www.ccl.net/jobs If your mail is bouncing from CCL.NET domain send it to the maintainer: Jan Labanowski, jkl(at)ccl.net (read about it on CCL Home Page) -+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+-+