From chemistry-request*- at -*ccl.net Fri Jan 16 10:00:46 2004 Received: from plounts.uits.indiana.edu (plounts.uits.indiana.edu [129.79.1.73]) by server.ccl.net (8.12.8/8.12.8) with ESMTP id i0GF0ic1007763 for ; Fri, 16 Jan 2004 10:00:44 -0500 Received: from grapeape.uits.iupui.edu (grapeape.uits.iupui.edu [134.68.220.203]) by plounts.uits.indiana.edu (8.12.10/8.12.10/IUPO) with ESMTP id i0GF1UTY019240 for ; Fri, 16 Jan 2004 10:01:30 -0500 (EST) Received: from iupui.edu ([134.68.57.154]) by grapeape.uits.iupui.edu (8.12.10/8.12.10/IUPO) with ESMTP id i0GF1VdX016470 for ; Fri, 16 Jan 2004 10:01:31 -0500 (EST) Message-ID: <4007FCD6.2040101.-at-.iupui.edu> Date: Fri, 16 Jan 2004 10:01:42 -0500 From: "Q.Z." User-Agent: Mozilla/5.0 (X11; U; Linux i686; en-US; rv:1.4) Gecko/20030624 Netscape/7.1 X-Accept-Language: en-us, en MIME-Version: 1.0 To: chemistry.-at-.ccl.net Subject: CCL: calculate relative hydrophobicity Content-Type: text/plain; charset=ISO-8859-1; format=flowed Content-Transfer-Encoding: 7bit X-Spam-Status: No, hits=0.0 required=7.0 tests=none autolearn=no version=2.61 X-Spam-Checker-Version: SpamAssassin 2.61 (1.212.2.1-2003-12-09-exp) on servernd.ccl.net Hi All, I wonder anyone knows a free program to calculate the relative hydrophobicity of a ligand binding pocket in proteins. Thanks. Q.Z.