From owner-chemistry ^%at%^ ccl.net Fri Jun 23 07:11:00 2017
From: "Manish Kumar Gupta mkgupta5-,-gmail.com" <owner-chemistry * server.ccl.net>
To: CCL
Subject: CCL: To calculate ligand binding site in VINA
Message-Id: <-52862-170623070821-13357-qb1yJAWj7Rhgb94hGf3L3w * server.ccl.net>
X-Original-From: "Manish Kumar  Gupta" <mkgupta5]=[gmail.com>
Date: Fri, 23 Jun 2017 07:08:19 -0400


Sent to CCL by: "Manish Kumar  Gupta" [mkgupta5 * gmail.com]
Hi
I am working of Ligand-Receptor docking using VINA.
How to define binding site coordinates in VINA.



Previously, I was using GOLD which uses straightforward approaches like Ligand/ 
a central point/residue list to define the binding site.    

Please reply

Manish