From chemistry-request \\at// server.ccl.net Wed Feb 26 12:52:05 2003 Received: from ARLABBH01.ds.arl.army.mil ([192.12.65.18]) by server.ccl.net (8.11.6/8.11.0) with ESMTP id h1QHq5a24235 for ; Wed, 26 Feb 2003 12:52:05 -0500 Received: from ARLABML01.ds.arl.army.mil ([128.63.57.73]) by ARLABBH01.ds.arl.army.mil with Microsoft SMTPSVC(5.0.2195.5329); Wed, 26 Feb 2003 12:53:45 -0500 x-mimeole: Produced By Microsoft Exchange V6.0.6249.0 content-class: urn:content-classes:message MIME-Version: 1.0 Content-Type: text/plain; charset="us-ascii" Disposition-Notification-To: "Zottola, Mark" Subject: Loops in Homology modeling Date: Wed, 26 Feb 2003 12:52:36 -0500 Message-ID: <3DEB727CED850444BC67A65ECB26796A2EDB5C "at@at" ARLABML01.ds.arl.army.mil> X-MS-Has-Attach: X-MS-TNEF-Correlator: Thread-Topic: Loops in Homology modeling Thread-Index: AcLdv6aY2luR0CrNSTajYvuVNNOahQ== From: "Zottola, Mark" To: X-OriginalArrivalTime: 26 Feb 2003 17:53:45.0655 (UTC) FILETIME=[01FC0C70:01C2DDC0] Content-Transfer-Encoding: 8bit X-MIME-Autoconverted: from quoted-printable to 8bit by server.ccl.net id h1QHq5a24236 I am trying to model some proteins. Unfortunately they have several cysteines which are undoubtedly linked as disulfide bridges. Are there any good tomes, web pages, etc. for handling how to model these bridges. The Wloop server seems intersting, but it seems to assume one already understands how to model these loops. Any pointers for this would be rgeatly appreciated! Best Regards, Mark ************************************************ Dr. Mark A. Zottola PET Director of Computational Chemistry and Materials Army Research Laboratory Aberdeen Proving Grounds PB #134 939-I Beards Hill Road Aberdeen, MD 21001 Voice: 410 278 7250 FAX: 410 297 9521 Email: mzottola-: at :-arl.army.mil