From chemistry-request@server.ccl.net Mon Oct 21 15:50:46 2002 Received: from GWIA.HSC.WVU.EDU ([157.182.105.18]) by server.ccl.net (8.11.6/8.11.0) with ESMTP id g9LJokG16885 for ; Mon, 21 Oct 2002 15:50:46 -0400 Received: from HSC-DOM5-MTA by GWIA.HSC.WVU.EDU with Novell_GroupWise; Mon, 21 Oct 2002 15:50:43 -0400 Message-Id: X-Mailer: Novell GroupWise Internet Agent 6.0.2 Date: Mon, 21 Oct 2002 15:50:10 -0400 From: "Peter Gannett" To: "<" Subject: amber and namd Mime-Version: 1.0 Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: 7bit Content-Disposition: inline All: I am exploring using NAMD to run dynamics and want to run some comparisons. I currently use amber/sander so I have topology/coordinate files in amber format. I know NAMD can use these and that a config script/file has to be set up. Being lazy, I was wondering if someone had such a file that would run a dynamics run with amber topology/coordinate files under NAMD. Thanks. Pete Gannett