Re: CCL:calculate chi angle, surface area
- From: Anton Feenstra <feenstra{at}chem.vu.nl>
- Organization: Vrije Universiteit Amsterdam - Pharmaceutical
Chemistry
- Subject: Re: CCL:calculate chi angle, surface area
- Date: Tue, 06 Jan 2004 08:00:11 +0100
Sivanesan Dakshanamurthy wrote:
Dear All:
I looking for a program to calculate the following:
surface area of a protein, 'chi' angle of a given sidechain, to generate 3D
graph of a given data apart from excel.
There are such tools in the Gromacs MD package, which can be downloaded
for free at www.gromacs.org. Look for g_chi, g_sas, and g_sgangle.
--
Groetjes,
Anton
_____________ _______________________________________________________
| | |
| _ _ ___,| K. Anton Feenstra |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
|( | )| | | De Boelelaan 1083 - 1081 HV Amsterdam - Netherlands |
| \_/ \_/ | | | Tel: +31 20 44 47608 - Fax: +31 20 44 47610 |
| | Feenstra{at}chem.vu.nl - www.chem.vu.nl/~feenstra/ |
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