CCL: polarisable force field for new molecule

 Sent to CCL by: "Lukasz Cwiklik" [cwiklik\a/gmail.com]
 On 9/26/06, Bala Subramanian bala**igib.res.in <owner-chemistry|-|ccl.net>
 wrote:
 
 Sent to CCL by: "Bala  Subramanian" [bala|*|igib.res.in]
 Dear CCL users,
 I am working on nucleic acid-drug interaction. I am very new to this. I want to
 use polarisable force field to simulate the complex. I can use ff02 for my DNA
 in amber, but i dnt know how to generate polarisable ff for ligand or in general
 any new molecule.Someone please suggest me on how i can do this.
 
 Hi,
 Not so long ago I was preparing polarizable force field parameters for
 simulations of small molecules in Amber. I found very useful the web
 page of Ulf Ryde:
 http://www.teokem.lu.se/~ulf/Methods/resp.html
 I have also prepared a tutorial how to do such a parametrization step
 by step. You can find it on my web page:
 http://www.molecular.cz/~cwiklik/publ.html
 (direct link: http://www.molecular.cz/~cwiklik/materials/resp_fitting.pdf)
 Best regards,
 Lukasz Cwiklik
 --
 Lukasz Cwiklik
 http://www.molecular.cz/~cwiklik