From owner-chemistry@ccl.net Mon Mar 12 14:03:00 2007
From: "Mark Fleharty mark.fleharty%gmail.com" <owner-chemistry#%#server.ccl.net>
To: CCL
Subject: CCL: Force Field Explorer difficulty with display
Message-Id: <-33783-070312140130-27034-brVKYB9LK4i9T6Vu71IvQQ#%#server.ccl.net>
X-Original-From: "Mark Fleharty" <mark.fleharty#,#gmail.com>
Content-Type: multipart/alternative; 
	boundary="----=_Part_8733_17898950.1173722473465"
Date: Mon, 12 Mar 2007 12:01:13 -0600
MIME-Version: 1.0


Sent to CCL by: "Mark Fleharty" [mark.fleharty|-|gmail.com]
------=_Part_8733_17898950.1173722473465
Content-Type: text/plain; charset=ISO-8859-1; format=flowed
Content-Transfer-Encoding: 7bit
Content-Disposition: inline

Dr. Hultin,

I have found out a few things.  The problem I was having was due to my ATI
video card not being compatable with the version of Java3D shiped with FFE.
One way around this is to install a newer version of Java3D, and then double
click on FFE's .jar file.

The points you made are all good ones.  I have found a few issues related to
using a windows based text editor, and unix based editor on a .xyz file can
cause some files not to work properly with TINKER even though they look
perfectly good.  The problem appears (to me anyway) to be related to Windows
use of a carriage return and new line, rather than just a new line that unix
uses.  I used the cygwin utility dos2unix on all the .xyz files, and viola,
they all worked.

Thanks,

Mark

>
>

------=_Part_8733_17898950.1173722473465
Content-Type: text/html; charset=ISO-8859-1
Content-Transfer-Encoding: 7bit
Content-Disposition: inline

Dr. Hultin,<br><br>I have found out a few things.&nbsp; The problem I was having was due to my ATI video card not being compatable with the version of Java3D shiped with FFE.&nbsp; One way around this is to install a newer version of Java3D, and then double click on FFE&#39;s .jar file.
<br><br>The points you made are all good ones.&nbsp; I have found a few issues related to using a windows based text editor, and unix based editor on a .xyz file can cause some files not to work properly with TINKER even though they look perfectly good.&nbsp; The problem appears (to me anyway) to be related to Windows use of a carriage return and new line, rather than just a new line that unix uses.&nbsp; I used the cygwin utility dos2unix on all the .xyz files, and viola, they all worked.
<br><br>Thanks,<br><br>Mark<br><div><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;"><div link="blue" vlink="blue" lang="EN-CA"><div><p><font color="navy" face="Arial" size="2">
<span style="font-size: 10pt; font-family: Arial; color: navy;">&nbsp;</span></font></p></div></div></blockquote></div><br>

------=_Part_8733_17898950.1173722473465--