CBHD
Newsletter Issue 28 - December 2, 2004 |
CONTENTS:
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Online version of this newsletter: http://gchelpdesk.ualberta.ca/news/02dec04/cbhd_news_02dec04.php |
Welcome to the twenty-eighth issue of the Canadian Bioinformatics Help Desk (CBHD) Newsletter. Back issues of this newsletter can be viewed from our newsletter archive (http://gchelpdesk.ualberta.ca/news/news.php). Our circulation base has recently exceeded 1400 subscribers. In this issue we feature a Software Spotlight article on the release of Chinook version 1.0 from Canada's Michael Smith Genome Sciences Centre. This biweekly newsletter is intended to keep Genome Canada researchers and other Help Desk users informed about new software, events, job postings, conferences, training opportunities, interviews, publications, awards, and other newsworthy items concerning bioinformatics, genomics, and proteomics. The CBHD newsletter is a mandated service of the Help Desk and we hope to provide enough useful content to keep you interested and informed. If you know of anyone who would be interested in receiving future issues of this newsletter, contributing content to the newsletter, submitting useful scripts or applications to the Help Desk Software Repository, or bringing new bioinformatics web servers to our attention, please email us at ian!=!gchelpdesk.ualberta.ca. To subscribe to this newsletter, click here. To unsubscribe from this newsletter, send an email message to ian _ gchelpdesk.ualberta.ca with the word "unsubscribe" in the subject or body of your message. |
1) Software Spotlight |
2) What's New? |
1 Dec 2004 | New BIND Datasets - Scientists at the Blueprint Initiative have added 996
interaction records from a Saccharomyces cerevisiae Protein-RNA
dataset to the BIND database. A new protein-DNA dataset from
a recent
study on methyl-CpG binding proteins has been imported into
BIND. Submit your own interaction datasets to BIND through the
BIND website (high
throughput or individual interactions).
Source: Blueprint.org |
8 Nov 2004 | PathwayAssist™ 3.0
Release - Ariadne Genomics, Inc. announced the latest release of
PathwayAssist™, "desktop software for the visualization and analysis of
biological pathways." As stated on their web page, "The new software
includes a database of 500,000+ molecular interactions for pathway data
mining, significantly improved visualization tools, and wizards for
data import and export. The PathwayAssist™ 3.0 software from Ariadne
Genomics' PathwayStudio™ Suite of products is a state-of-the-art tool
for building, analysis, expansion and navigation of biological
pathways, gene regulation networks and protein interaction maps."
Source: Ariadne
Genomics Press Release |
3) Upcoming Events |
ISCB-Sponsored
Conferences -
There are many bioinformatics and computational biology related
conferences that are sponsored by The International Society for
Computational Biology. For a listing of ISCB-sponsored conferences,
please visit http://www.iscb.org/events/event_board.php |
|
10-12 Dec 2004 | Rocky '04 - The
second annual Rocky Mountain Regional Bioinformatics Conference will be
held in Aspen, Colorado on December 10-12, 2004. For further details,
please visit http://www.iscb.org/events/event_data.php?200 |
16-19 Dec 2004 | International
Conference on Bioinformatics and its Applications (ICBA '04)
- This conference will be held in Fort Lauderdale, Florida, on December
16-19, 2004. The main focus of this conference will be "major developments,
problems, and trends and applications in Bioinformatics." For more information, please visit http://www.iscb.org/events/event_data.php?144 |
4-8 Jan 2005 | Pacific Symposium
on Biocomputing 2005
- This ISCB-sponsored event will be held on the Kohala Coast on the
Island of Hawaii on January 4-8, 2005. According to the ISCB
announcement, this conference will feature presentations on "databases,
algorithms, interfaces, visualization, modeling, and other
computational methods, as applied to biological problems, with emphasis
on applications in data-rich areas of molecular biology." For further
details, please visit http://www.iscb.org/events/event_data.php?183 |
10-13 Jan 2005 | CHI's Pep Talk - "The Protein Information Week" will
take place in San Diego, California, on January 10-13, 2005.
"Proteomics in a Six-Pack" includes proteomics conferences on: Protein
Arrays, Protein Expression, Protein Folding Disorders, Protein Process
Development, Human Proteome, and Protein Therapeutics. For further
details, please visit http://www.chi-peptalk.com/. |
4) Help Desk Software Repository |
5) Bioinformatics Jobs |
Job Title | Location | Date Posted |
Tier 1 Canada Research Chair - Proteomics / Bioinformatics | Vancouver, BC |
December 3, 2004 |
Canada Research Chair in Bioinformatics | Ottawa, ON |
December 2, 2004 |
Post-doctoral
Associate |
Toronto, ON | November 18, 2004 |
BIOINFORMATICS
FACULTY POSITION |
Burnaby, BC |
November 5, 2004 |
Several positions at Blueprint |
Toronto, ON |
October 7, 2004 |
Bioinformatics/Systems
Biology |
Hamilton, ON | October 5, 2004 |
Ian J.
Forsythe, M.Sc.
Phone: (780)
492-5969 — Fax: (780) 492-9234Bioinformatician, Canadian Bioinformatics Help Desk University of Alberta, Department of Biological Sciences, CW 405 Edmonton, AB, Canada T6G 2E9 Email: ian * gchelpdesk.ualberta.ca Website: http://gchelpdesk.ualberta.ca |
The Canadian
Bioinformatics Help Desk, as part of the Integrated
and Distributed Bioinformatics Platform, is supported by Genome
Prairie, in part through Genome
Canada, a not-for-profit corporation which is leading a national
strategy on genomics with $375 million in funding from the Government
of Canada. |
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