From chemistry-request ^at^ server.ccl.net Fri Apr 5 08:52:55 2002 Received: from mail.fqspl.com.pl ([212.244.147.20]) by server.ccl.net (8.11.6/8.11.0) with SMTP id g35Dqgp24403 for ; Fri, 5 Apr 2002 08:52:54 -0500 Received: (qmail 32228 invoked from network); 5 Apr 2002 13:52:44 -0000 Received: from test.fqspl.com.pl (HELO test) (10.10.10.50) by mail.fqspl.com.pl with SMTP; 5 Apr 2002 13:52:44 -0000 Message-ID: <00e901c1dca9$3f922290$320a0a0a ^%at%^ test> From: "Victor Anisimov" To: Subject: MESP visualization Date: Fri, 5 Apr 2002 15:53:21 +0200 MIME-Version: 1.0 Content-Type: text/plain; charset="koi8-r" Content-Transfer-Encoding: 7bit X-Priority: 3 X-MSMail-Priority: Normal X-Mailer: Microsoft Outlook Express 5.50.4133.2400 X-MimeOLE: Produced By Microsoft MimeOLE V5.50.4133.2400 Dear CCLers, I'd like to make nice 3D visualization of a molecular electrostatic potential calculated for 120 000 atoms protein system on Connolly surface. My MESP file is a textual file with three columns corresponding to Cartesian coordinates of a point and fourth column containing MESP value, i.e. each line corresponds to a separate point on the Connolly surface. Number of points on one Connolly surface is about one million. No cube format is possible I guess by size of the molecule and number of the mesh points one would need to store in the cube file. Can someone suggest me a free software that can read this file and draw nice 3D map with colours corresponding to MESP value? My hardware limitation is 1GB RAM and Windows/Linux single Athlon CPU machine. I'd greatly appreciate any hints. Thank you in advance, Victor.