From chemistry-request%!at!%ccl.net Mon Jun 27 13:42:59 2005 Received: from f05n03.cac.psu.edu (f05s03.cac.psu.edu [128.118.141.46]) by server.ccl.net (8.13.1/8.13.1) with ESMTP id j5RHgvt5023349 for >ccl.net>; Mon, 27 Jun 2005 13:42:57 -0400 Received: from blue.chem.psu.edu (blue.chem.psu.edu [128.118.56.38]) by f05n03.cac.psu.edu (8.13.2/8.13.2) with ESMTP id j5RG4wiS073752 for >ccl.net>; Mon, 27 Jun 2005 12:05:02 -0400 Subject: Re: CCL:3D->2D softwares? From: Rajarshi Guha >psu.edu> Reply-To: rxg218<>psu.edu To: chemistry<>ccl.net In-Reply-To: References: <20050618225857.40395.qmail<>web41201.mail.yahoo.com> >scripps.edu> Content-Type: text/plain Date: Mon, 27 Jun 2005 12:04:57 -0400 Message-Id: <1119888298.24210.35.camel<>blue.chem.psu.edu> Mime-Version: 1.0 X-Mailer: Evolution 2.0.2 (2.0.2-3) Content-Transfer-Encoding: 7bit X-Virus-Scanned: by amavisd-new X-Spam-Status: No, score=0.5 required=5.0 tests=FROM_ENDS_IN_NUMS autolearn=no version=3.0.4 X-Spam-Checker-Version: SpamAssassin 3.0.4 (2005-06-05) on server.ccl.net On Mon, 2005-06-27 at 15:56 +0800, JunJun Liu wrote: > Dear All: > > Is there a software in linux can convert 3D small organic structures > to 2D > sketch structures? It will be more preferable if the software has a > function of exporting 2D structures to picutures. Thanks in advance! The CDK ( http://almost.cubic.uni-koeln.de/cdk/ ) can do this. There is an example program at http://blue.chem.psu.edu/~rajarshi/code/java/#draw2d (Currently it only takes SDF as input) ------------------------------------------------------------------- Rajarshi Guha >psu.edu> GPG Fingerprint: 0CCA 8EE2 2EEB 25E2 AB04 06F7 1BB9 E634 9B87 56EE ------------------------------------------------------------------- If you don't get a good night kiss, you get Kafka dreams." -Hobbes