Re: CCL:relative solvent accessible surface
Hi Jean-Luc.
> What software package is able to calculate the relative solvent
> accessible surface of proteins ?
Check out
http://www.embl-heidelberg.de/Services/argos/ASC.21/asc2.html
ASC is a package that is shell-oriented. If you want to use the software
from within your own programs, use the NSC package
http://www.embl-heidelberg.de/Services/argos/ASC.21/nsc2-down.html
I wrote a Python wrapper for NSC which is fully interfaced with Konrad
Hinsen's Molecular Modelling Toolkit
(http://starship.skyport.net/crew/hinsen/mmtk.html). With
this you can
query your proteins/macromolecules for their surface. Feel free to
contact me if you're interested.
Cheers,
Lutz
---------------------
Lutz Ehrlich
Structural Biology
EMBL
Meyerhofstr. 1
D-69012 Heidelberg
Germany
email: lutz.ehrlich ^at^ embl-heidelberg.de
web : http://www.embl-heidelberg.de/~ehrlich
phone: +49-6221-387-140
fax : +49-6221-387-517