From chemistry-request@www.ccl.net Wed Feb 24 23:55:22 1999 Received: from mcbsgs1.imcb.nus.edu.sg (mcbsgs1.imcb.nus.edu.sg [137.132.42.51]) by www.ccl.net (8.8.3/8.8.6/OSC/CCL 1.0) with SMTP id XAA26975 Wed, 24 Feb 1999 23:55:17 -0500 (EST) Received: from imcb.nus.edu.sg ([137.132.42.198]) by mcbsgs1.imcb.nus.edu.sg (950413.SGI.8.6.12/950213.SGI.AUTOCF) via ESMTP id MAA07684 for ; Thu, 25 Feb 1999 12:59:18 +0800 Message-ID: <36D4D612.D15DB959@imcb.nus.edu.sg> Date: Thu, 25 Feb 1999 12:48:18 +0800 From: mcbskt Reply-To: mcbskt@mcbsgs1.imcb.nus.edu.sg Organization: Institute of Molecular & Cell Biology X-Mailer: Mozilla 4.08 [en] (WinNT; I) MIME-Version: 1.0 To: CCL Subject: Problem installing Naccess v2.1 software for LINUX RedHat Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit I tried to install Naccess ( software for calculating solvent accessibility of protein) in a LINUX RedHat 5.1. The following is some information for diagnosis: Anyone with similar problem before and had solved it, please advice. Thank you. Seow, Kah-Tong IMCB, NUS ################################################## The compiler in Linux RedHat is g77 $ naccess installation program $ ---------------------------- $ installing naccess in directory /naccess2.1.1 $ created naccess - cshell script $ compiling accall.f $ done Output of csh install.scr with modification in install.scr to f77 -Wall accall.f: In program `accall': accall.f:71: warning: unused variable `hgen' accall.f:65: warning: unused variable `reslabel' accall.f:62: warning: unused variable `b' accall.f:43: warning: unused variable `outputtype' accall.f:270: warning: `nchain' might be used uninitialized in this function accall.f: In subroutine `solva': accall.f:740: warning: unused variable `c' accall.f: In subroutine `vanin': accall.f:1257: warning: unused variable `ok' accall.f:1255: warning: unused variable `aa4' Screen output of naccess xxx.pdb ******************************** naccess: using vdw.radii in local directory naccess: using STD FILE in local directory startio: error in format apparent state: unit 4 named .log last format: (a,i,a,i,a) lately writing sequential formatted external IO Abort (core dumped) content of xxx.log for the above xxx.pdb ********************************** ACCALL - Accessibility calculations