Problem installing Naccess v2.1 software for LINUX RedHat
- From: mcbskt <mcbskt $#at#$ mcbsgs1.imcb.nus.edu.sg>
- Organization: Institute of Molecular & Cell Biology
- Subject: Problem installing Naccess v2.1 software for LINUX
RedHat
- Date: Thu, 25 Feb 1999 12:48:18 +0800
I tried to install Naccess ( software for calculating solvent
accessibility of protein) in a LINUX RedHat 5.1.
The following is some information for diagnosis:
Anyone with similar problem before and had solved it, please advice.
Thank you.
Seow, Kah-Tong
IMCB, NUS
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The compiler in Linux RedHat is g77
$ naccess installation program
$ ----------------------------
$ installing naccess in directory /naccess2.1.1
$ created naccess - cshell script
$ compiling accall.f
$ done
Output of csh install.scr with modification in install.scr to f77 -Wall
accall.f: In program `accall':
accall.f:71: warning: unused variable `hgen'
accall.f:65: warning: unused variable `reslabel'
accall.f:62: warning: unused variable `b'
accall.f:43: warning: unused variable `outputtype'
accall.f:270: warning: `nchain' might be used uninitialized in this
function
accall.f: In subroutine `solva':
accall.f:740: warning: unused variable `c'
accall.f: In subroutine `vanin':
accall.f:1257: warning: unused variable `ok'
accall.f:1255: warning: unused variable `aa4'
Screen output of naccess xxx.pdb
********************************
naccess: using vdw.radii in local directory
naccess: using STD FILE in local directory
startio: error in format
apparent state: unit 4 named .log
last format: (a,i,a,i,a)
lately writing sequential formatted external IO
Abort (core dumped)
content of xxx.log for the above xxx.pdb
**********************************
ACCALL - Accessibility calculations