autodock, mkdpf3

From: "Carsten Detering" <detering %-% at %-% u.washington.edu>
Subject: autodock, mkdpf3
Date: Fri, 18 Jan 2002 02:38:33 +0100

hi fellow autodock users,
 does any of you know why my mkdpf3 and mkgpf3 work only in my home (~)
 directory?? it is really anoying to always copy the files needed to create
 the .dpf and .gpf files there. even if i specify the whole path to my .pdbq
 and .pdbqs files, it doesent work (that appeared to be the problem with the
 mol2topdbq scripts, among others). i am working on sgi irix 6.5.
 further, has anyone of you calibrated the free energy coefficients for
 different systems than proteins??
 thank you for any useful answers
 carsten
 ------------------------
 Carsten Detering, Ph. D.
 Varani Research Group
 University of Washington
 email: detering %-% at %-% u.washington.edu