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Subject: Fw:(by songyunlong@263.net)=?gb2312?B?SG93IHRoZSBwYXJ0aWFsIGNoYXJnZXMgYmUgY29tcHV0ZWQgaW4gQ1ZGRiBmb3JjZSBmaWVs
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Date: Thu, 21 Mar 2002 11:08:43 +0800 (CST)
From: "宋云龙" <songyunlong@263.net>
To: chemistry@ccl.net
Subject: =?gb2312?B?SG93IHRoZSBwYXJ0aWFsIGNoYXJnZXMgYmUgY29tcHV0ZWQgaW4gQ1ZGRiBmb3JjZSBmaWVs

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Dear all the CCLers:
    I am a user of InsightII of Accelrys(former MSI). When I perform comutations,such as molecular minization or dynamics,I often use CVFF force field. I always use FF (Force Field). This command is activated on the left side by clicking on the FF button. Then select Forcefield/Potentials and make sure that all of the settings as follows.
            Potential Action [Fix]

            Partial Charge Action [Fix]

            Formal Charge Action [Fix or Accept] 

    My question is how the partial charges of my molecules are computed? In my opinion,the partial charges are part of the CVFF force field. When CVFF is used, the partial charges are automatically loaded from the system file. This is quite different from MM2 (Tripos) method which often calculate partial charge through Gasteiger-Huckel method for small molecules.Is this so? I have referred several papers, but find no how the charges are computed.

    I am eager to get any helpful suggestions.


    Thank you in advance!


Song Yunlong
songyunlong@263.net





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