view CHARMM trajectory
- From: "Yu Sun (Denis)" <sun(at)CLEMSON.EDU>
- Subject: view CHARMM trajectory
- Date: Wed, 12 May 2004 17:17:02 -0400
Hi, everybody,
Could someone suggest me how to view CHARMM trajectory file ? I tried
to
use VMD but it failed. I intended to post this message to CHARMM forum
but
I cannot find the "post new message button " today as
before.
Thanks,
Yu
--------------------------------------------------
Error message from VMD:
Info) Using plugin psf for structure file C:/Documents and
Settings/Denis/My Doc
uments/sim_experiments/12-MAY-04/2ech.psf
Info) Analyzing structure ...
Info) Atoms: 713
Info) Residues: 49
Info) Waters: 0
Info) Segments: 1
Info) Fragments: 1 Protein: 1 Nucleic: 0
ERROR) Error reading optional structure information from coordinate
file
C:/Docu
ments and Settings/Denis/My Documents/sim_experiments/12-MAY-04/2ech_run.cor
ERROR) Will ignore structure information in this file.
Info) Using plugin cor for coordinates from file C:/Documents and
Settings/Denis
/My Documents/sim_experiments/12-MAY-04/2ech_run.cor
ERROR) Incorrect number of atoms (0) in
ERROR) coordinate file C:/Documents and Settings/Denis/My
Documents/sim_experime
nts/12-MAY-04/2ech_run.cor
Info) Finished with coordinate file C:/Documents and Settings/Denis/My
Documents
/sim_experiments/12-MAY-04/2ech_run.cor.