Re: CCL:Effect of oxidation on electron density



 Hello Noel and All!
 On Tue, 19 Apr 2005, Noel O'Boyle wrote:
 
 I am using Gaussian03 and have calculated the electron density of the
 molecule in its oxidised state (at the geometry of the native state) and
 subtracted this from the electron density of the molecule in its native
 state.
 However, I have just noticed that the total spin density of the oxidised
 molecule gives an almost identical picture. Is this true in general? (I
 don't have a good understanding of what the total spin density shows.)
 
 
No. Spin density and total electron density difference are two different and more or less independent creatures, though they _can_ be located to similar regions of the molecule (as apparently for you). Spin density is much more free to change after, for example, oxidation/reduction. The electron density is much more restricted as it is bound by classical electrostatic forces.
 
I've done some studies comparing electron and spin density changes during oxidation/reduction of iron porphyrins [1-3]. Perhaps they are of some interest.
 Have a nice day,
     Mikael J.
     http://www.helsinki.fi/~mpjohans/
 [1] M.P. Johansson, M.R.A. Blomberg, D. Sundholm, M. Wikström, "Change
 in
     electron and spin density upon electron transfer to haem", Biochim.
     Biophys. Acta - Bioenergetics 1553 (2002) 183-187.
 [2] M.P. Johansson, D. Sundholm, G. Gerfen, M. Wikström, "The Spin
     Distribution in Low-Spin Iron Porphyrins", J. Am. Chem. Soc. 124
     (2002) 11771-11780
 [3] M.P. Johansson, D. Sundholm, "Spin and charge distribution in iron
     porphyrin models: A coupled cluster and density-functional study",
     J. Chem. Phys. 120 (2004) 3229-3236.