Re: CCL:QSAR Datasets (and others) - Call for Data
- From: "Joerg K. Wegner" <wegnerj {}
informatik.uni-tuebingen.de>
- Organization: Department of Computer Architecture
- Subject: Re: CCL:QSAR Datasets (and others) - Call for Data
- Date: Thu, 28 Apr 2005 17:35:20 +0200
Hi Andreas,
thanks for the new 'Graph Mining' section, and please
1. update the MolFea link to:
http://www.predictive-toxicology.org/cgi-bin/molfea/molfea.cgi
2. and add the LAZAR link:
http://www.predictive-toxicology.org/lazar/form.php
3. Add cross-links from:
http://hms.liacs.nl/index.html
Kind regards, Joerg
Dear CCL'lers,
About one year ago we set up a molecular dataset repository which can
be
accessed freely at http://www.cheminformatics.org
We would like to extend our directory from the current 36 datasets
further to make it even more useful to visitors. Therefore: If you have
published any study relating molecular structures to their properties
we
would kindly like to enquire whether it is possible to make this
dataset
available. This will enable scientist to compare methods more easily -
and ensure you their (and my) eternal gratitude.
The directory now comprises 36 classified datasets. Omong others the
categories comprise binary datasets [active/inactive against a
particular target], QSAR and QSPR datasets, and toxicity, metabolism
and
permeability datasets. They include molecular structures in most cases,
usually in SMILES or SD format, in order to facilitate the generation
of
any descriptor, as well as measured properties. The web site has also
been featured in Current Opinion in Drug Discovery and Development
recently (2004 7(4), 393-394) and enjoys about 30 visitors every day.
It is your choice whether we link to your website or host the dataset
ourselves. In the simplest case you just have to send us your data - we
will do the rest.
Please note that this repository is restricted to published
structure-property datasets and is no general repository of molecular
structures. Therefore it is complementary to several other initiatives
in this area which aim at providing more comprehensive databases.
Have a good spring,
Looking forward to hearing from you,
Andreas
--
Dipl. Chem. Joerg K. Wegner
Center of Bioinformatics Tuebingen (ZBIT)
Department of Computer Architecture
Univ. Tuebingen, Sand 1, D-72076 Tuebingen, Germany
Phone: (+49/0) 7071 29 78970
Fax: (+49/0) 7071 29 5091
E-Mail: mailto:wegnerj {} informatik.uni-tuebingen.de
WWW: http://www-ra.informatik.uni-tuebingen.de
--
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(E. Hemingway)
Never mistake action for meaningful action.
(Hugo Kubinyi,2004)