From owner-chemistry@ccl.net Fri Aug  3 14:57:00 2007
From: "=?ISO-8859-1?Q?Sina_T=FCreli?= sinatureli ~~ gmail.com" <owner-chemistry]![server.ccl.net>
To: CCL
Subject: CCL: adding hydrogens
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Date: Fri, 3 Aug 2007 12:42:52 +0300
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AgnusLab is a freeware program that can do that.

AS of not freewares, spartan can do that from the properties window, I think
hydrochem can too and all the other molecular modelling programs probably :p

But I would strongly suggest AgnusLab, which is a great shareware program

On 8/2/07, Max Porrini mozz76(0)gmail.com <owner-chemistry{:}ccl.net> wrote:
>
> Hi all
> Does anybody know how I can add hydrogens to a system?
> I've downloaded the pdb file of a enzyme and there aren't hydrogen atoms
> (for instance the water molecule is formed only by the oxygen).
> I'd like to saturate my system with the missing hydrogens.
> Any tips will be very appreciated.
> thanks a lot
> MP
>

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AgnusLab is a freeware program that can do that.<br><br>AS of not freewares, spartan can do that from the properties window, I think hydrochem can too and all the other molecular modelling programs probably :p<br><br>But I would strongly suggest AgnusLab, which is a great shareware program
<br><br><div><span class="gmail_quote">On 8/2/07, <b class="gmail_sendername">Max Porrini mozz76(0)gmail.com</b> &lt;<a href="mailto:owner-chemistry{:}ccl.net">owner-chemistry{:}ccl.net</a>&gt; wrote:</span><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">
Hi all<br>Does anybody know how I can add hydrogens to a system?<br>I&#39;ve downloaded the pdb file of a enzyme and there aren&#39;t hydrogen atoms<br>(for instance the water molecule is formed only by the oxygen).<br>I&#39;d like to saturate my system with the missing hydrogens.
<br>Any tips will be very appreciated.<br>thanks a lot<br><span class="sg"><span>MP<br>
</span>
</span></blockquote></div><br>

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