From owner-chemistry@ccl.net Thu Aug  7 11:53:01 2008
From: "=?utf-8?Q?_Jorge_Rodr=C3=ADguez_Becerra?= jorberr[*]ciq.uchile.cl" <owner-chemistry__server.ccl.net>
To: CCL
Subject: CCL: how I can dock two ligand at same site acive?
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Date: Wed, 6 Aug 2008 01:32:52 -0400 (CLT)
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Sent to CCL by: =?utf-8?Q?_Jorge_Rodr=C3=ADguez_Becerra?= [jorberr%x%ciq.uchile.cl]
Hi, I have a system that present two ligand in the same active site (pi-stacking interactions between ligand). So, in the autodock 4 program I can`t use this dimer system becouse autodock recognizes only one ligand of the dimer (a connectivity problem). If someone can help me. Because I don't knwon, how I can dock two ligand at same site acive? 

I will greatly appreciate it if someone helps me

Jorge R