From owner-chemistry@ccl.net Tue Oct  2 08:27:00 2012
From: "lakshmi maganti lakshmimaganti6-$-gmail.com" <owner-chemistry*o*server.ccl.net>
To: CCL
Subject: CCL: Query
Message-Id: <-47696-121001095130-20839-71PbPOnRvbArXKVTXhle1w*o*server.ccl.net>
X-Original-From: "lakshmi  maganti" <lakshmimaganti6(~)gmail.com>
Date: Mon, 1 Oct 2012 09:51:28 -0400


Sent to CCL by: "lakshmi  maganti" [lakshmimaganti6__gmail.com]
I am  working as a research student .I have query regarding MD simulation.I wanted to perform MD simulation on a protein.That protein is in monomer in case of apo form and tetramer in case of ligand bound form.  four ligands(same structure) are bound to four chains.Wether i can continue my MD on monomer both in case of ligand bound and without ligand bound.please suggest me .

Thanking you