CCL:G: Failure Restarting Gaussian 09 Jobs



 Sent to CCL by: "Douglas B. Staple" [dstaple[*]dal.ca]
 Hi Andrew,
 
Yes, I can find the checkpoint file, but apparently Gaussian can't. Good idea to try an absolute path, I didn't know that was possible. I tried:
 %Chk=/home/dstaple/temp/benzene
 and
 %Chk=/home/dstaple/temp/benzene.chk
 Unfortunately both gave the same error as before.
 Thanks,
 Doug
 --
 Douglas B. Staple, Dr. rer. nat.
 Department of Physics and Atmospheric Science
 Dalhousie University
 Halifax NS  B3H 4R2
 Canada
 On 2013-11-20 1:03 PM, Andrew Yeung wrote:
 
 Hi Douglas
 Can Gaussian find the checkpoint file? Can you?
 
How about using an explicit reference to the checkpoint file rather than an implicit reference?
 
My checkpoint files have an extension of .chk. I'm not sure if Gaussian expects it.
 Andrew Yeung
 Donald J. Darensbourg Research Group
 Department of Chemistry, Texas A&M University
 3255 TAMU
 College Station, TX 77843-3255
 Tel: 979 845 4837
 Fax: 979 845 0158
 On 2013-11-20 10:11 AM, Douglas B. Staple dstaple^^^dal.ca wrote:
 
 Sent to CCL by: "Douglas B. Staple" [dstaple~~dal.ca]
 
For some reason I can't get Gaussian 09 to restart jobs that are prematurely terminated. Here is a test job:
 http://myweb.dal.ca/~dstaple/benzene.gjf
 
Obviously the real jobs that are causing me issues are larger than benzene, but the errors are exactly the same.
 
I terminate the geometry optimization by hitting ctrl+C and then try to restart the job using a new benzene.gjf file with the following form:
 %NProcShared=8
 %Mem=10GB
 %Chk=benzene
 
# PBEPBE/AUG-cc-pVDZ SCF(NoVarAcc,Fermi,XQC) Integral(Grid=UltraFine,Acc2E=12) Opt=Restart
 I've tried various modifications to the route line, such as:
 # SCF(NoVarAcc,Fermi,XQC) Integral(Grid=UltraFine,Acc2E=12) Opt=Restart
 or:
 
# PBEPBE/AUG-cc-pVDZ SCF(NoVarAcc,Fermi,XQC) Integral(Grid=UltraFine,Acc2E=12) Opt Geom=AllCheck Guess=Read
 
Each time, I get output that contains the error "FileIO operation on non-existent file", ultimately terminating in a segmentation violation. I uploaded typical output (stdout and stderr) here:
 http://myweb.dal.ca/~dstaple/benzene.e
 http://myweb.dal.ca/~dstaple/benzene.o
 
To make matters worse, the "real" jobs I'm interested in restarting are multi-part jobs consisting of geometry optimization plus polarity calculation, i.e. more like:
 http://myweb.dal.ca/~dstaple/benzene_multipart.gjf
 
I know this changes things, but until I can get a geometry optimization to restart it seems senseless to look at the multi-part jobs.
 What am I doing wrong?
 Thanks,
 Douglas Staple
 dstaple]*[dal.ca>>