CCL: looking for a parameter to characterize the degree of
delocalization
- From: Cina Foroutan-Nejad <canyslopus_+_yahoo.co.uk>
- Subject: CCL: looking for a parameter to characterize the degree of
delocalization
- Date: Thu, 19 Mar 2015 09:26:08 +0000 (UTC)
Dear Youhao,
There is a straighforward parameter defined within the context of QTAIM (quantum
theory of atoms in molecules). It is called delocalization index. It measures
the degree of electron sharing between two topological atoms. Many QTAIM
programs can define delocalization index between atomic pairs but usually they
do not partition it into orbital contributions. However, if you want you can
partition DI into orbital contributions by having overlap matrix for each atom.
Among AIM programs AIM2000 provides overlap matrix for atoms. I am not sure if
Multiwfn can do it or not but you may ask its developer. Once you have overlap
matrix for any atom, you can measure orbital contributions via a simple
equation:
DI(A,B) = - Sigma Sigma [Sij(A)Sij(B)]
Where A and B are two atoms, by Sigma as you may guess I mean summation, and
Sij(a and B) are overlap terms for each orbital. Please be careful that if you
merely focus on pi-orbitals then a part of DI which is related to partial
overlap between pi and sigma or delta... will be missing. For an ideally
symmetric system this must be zero but this is not necessarily true for all
systems. So, for non-planar/non-symmetric systems you may sum up contributions
of pi, sigma, etc. together then compare it with total DI to have the
contribution of mixing too. This type of computation is NOT conventional or
straightforward and I cannot refer you to a particular paper but theoretically
is possible. For more information regarding DI you may look at J. Phys. Chem. A,
1999, 103, 304-314.
On the other hand, some researchers believe that measuring current density in
the presence of magnetic fields is also a measure of pi-delocalization. You may
check some papers with the keyword current density but be aware that there is a
fundamental difference between DI and current density. DI is a ground-state
property but current density that is widely believed is a measure of pi electron
delocalization is a "response" property. This means that DI is
non-zero in the absence of external fields but current density is zero in the
absence of an external magnetic field.
Good luck,Cina
-------------------------------------------------------------------------Cina
Foroutan-Nejad, PhD,CEITEC-Central European Institute of TechnologyMasaryk
University, Brno,Czech Republichttps://muni.academia.edu/CinaForoutanNejad
On Thursday, 19 March 2015, 3:28, Youzhao Lan lyzhao(_)aliyun.com
<owner-chemistry.-$-.ccl.net> wrote:
Sent to CCL by: "Youzhao Lan" [lyzhao]_[aliyun.com]
Dear all,
Is there a calculated parameter or quantity to characterize
the degree of delocalization of pi-electron?
Any help will be appreciated.
Best regards.
Youzhao Lan
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<html><body><div style="color:#000; background-color:#fff;
font-family:bookman old style, new york, times,
serif;font-size:16px"><div dir="ltr"><span>Dear
Youhao,</span></div><div
dir="ltr"><span><br></span></div><div
dir="ltr" id="yui_3_16_0_1_1426755704295_7400"><span
id="yui_3_16_0_1_1426755704295_7401">There is a straighforward
parameter defined within the context of QTAIM (quantum theory of atoms in
molecules). It is called delocalization index. It measures the degree of
electron sharing between two topological atoms. Many QTAIM programs can define
delocalization index between atomic pairs but usually they do not partition it
into orbital contributions. However, if you want you can partition DI into
orbital contributions by having overlap matrix for each atom. Among AIM programs
AIM2000 provides overlap matrix for atoms. I am not sure if Multiwfn can do it
or not but you may ask its developer. Once you have overlap matrix for any atom,
you can measure orbital contributions via a simple
equation:</span></div><div dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span><br></span></div><div
dir="ltr" id="yui_3_16_0_1_1426755704295_7400"><span
id="yui_3_16_0_1_1426755704295_7763">DI(A,B) = - Sigma Sigma
[Sij(A)Sij(B)]</span></div><div dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span><br></span></div><div
dir="ltr" id="yui_3_16_0_1_1426755704295_7400"><span
id="yui_3_16_0_1_1426755704295_8105">Where A and B are two atoms,
by Sigma as you may guess I mean summation, and Sij(a and B) are overlap terms
for each orbital. Please be careful that if you merely focus on pi-orbitals then
a part of DI which is related to partial overlap between pi and sigma or
delta... will be missing. For an ideally symmetric system this must be zero but
this is not necessarily true for all systems. So, for non-planar/non-symmetric
systems you may sum up contributions of pi, sigma, etc. together then compare it
with total DI to have the contribution of mixing too. This type of computation
is NOT conventional or straightforward and I cannot refer you to a particular
paper but theoretically is possible. For more information regarding DI you may
look at J. Phys. Chem. A, 1999, 103, 304-314.</span></div><div
dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span><br></span></div><div
dir="ltr" id="yui_3_16_0_1_1426755704295_7400"><span
id="yui_3_16_0_1_1426755704295_11442">On the other hand, some
researchers believe that measuring current density in the presence of magnetic
fields is also a measure of pi-delocalization. You may check some papers with
the keyword current density but be aware that there is a fundamental difference
between DI and current density. DI is a ground-state property but current
density that is widely believed is a measure of pi electron delocalization is a
"response" property. This means that DI is non-zero in the absence of
external fields but current density is zero in the absence of an external
magnetic field. </span></div><div dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span><br></span></div><div
dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span>Good
luck,</span></div><div dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span>Cina</span></div><div
dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span><br></span></div><div
dir="ltr" id="yui_3_16_0_1_1426755704295_7400"><span
id="yui_3_16_0_1_1426755704295_12684">-------------------------------------------------------------------------</span></div><div
dir="ltr" id="yui_3_16_0_1_1426755704295_7400"><span
id="yui_3_16_0_1_1426755704295_12685">Cina Foroutan-Nejad,
PhD,</span></div><div dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span
id="yui_3_16_0_1_1426755704295_12686">CEITEC-Central European
Institute of Technology</span></div><div dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span
id="yui_3_16_0_1_1426755704295_12687">Masaryk
Universit</span>y, Brno,</div><div dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span>Czech
Republic</span></div><div dir="ltr"
id="yui_3_16_0_1_1426755704295_7400"><span
id="yui_3_16_0_1_1426755704295_12885"><a href="https://muni.academia.edu/CinaForoutanNejad"
id="yui_3_16_0_1_1426755704295_12884">https://muni.academia.edu/CinaForoutanNejad</a><br></span></div>
<div dir="ltr" id="yui_3_16_0_1_1426755704295_7400"
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On Thursday, 19 March 2015, 3:28, Youzhao Lan lyzhao(_)aliyun.com
<owner-chemistry.-$-.ccl.net> wrote:<br> </font>
</div> <br><br> <div
class="y_msg_container"><br>Sent to CCL by:
"Youzhao Lan" [lyzhao]_[aliyun.com]<br>Dear
all,<br>Is there a calculated parameter or quantity to
characterize<br>the degree of delocalization of
pi-electron?<br><br>Any help will be
appreciated.<br><br>Best regards.<br>Youzhao
Lan<br><br><br><br>-= This is automatically added to
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