From owner-chemistry@ccl.net Mon Mar 30 05:30:01 2015
From: "Syeda Sumayya Tariq sumayyatariq7|-|gmail.com" <owner-chemistry,+,server.ccl.net>
To: CCL
Subject: CCL: Can you help me with a HADDOCK error concerning distance restraints?
Message-Id: <-51204-150330052706-27560-ABhcrPLlDGtgWllI+8VTkA,+,server.ccl.net>
X-Original-From: "Syeda Sumayya Tariq" <sumayyatariq7..gmail.com>
Date: Mon, 30 Mar 2015 05:27:04 -0400


Sent to CCL by: "Syeda Sumayya Tariq" [sumayyatariq7() gmail.com]
Hi Everyone,

I have recently started working with HADDOCK stand alone and am facing some trouble running it. I wonder if anyone of you could help me in this regard.

I started with separating the 2 proteins in PDB ID: 1L4Z, and then docking them with HADDOCK 2.1. But it is giving me the following error,

TOTAL NUMBER OF DISTANCE RESTRAINTS FOR RIGID BODY DOCKING IS ZERO!
CONTROL YOUR PARAMETER SETTINGS AND RESTRAINT DEFINITIONS
STRUCTURE NUMBER 1

I have set up the Upper distance limit for AIRs as 2.0 when generating the air.tbl file and all the other restraints as default in the run.cns file.

I know it may be a naive question but please consider that I am new to this field. Any help would be highly appreciated.