CCL:G: The best molecule specification format
- From: Víctor Luaña Cabal
<victor+*+fluor.quimica.uniovi.es>
- Subject: CCL:G: The best molecule specification format
- Date: Sat, 18 Apr 2015 21:54:33 +0200
Sent to CCL by: =?iso-8859-1?Q?V=EDctor_Lua=F1a?= Cabal
[victor]^[fluor.quimica.uniovi.es]
On Sat, Apr 18, 2015 at 12:47:45PM -0400, Safiya Ess Amer amersaf85_-_yahoo.com
wrote:
>
> Sent to CCL by: "Safiya Ess Amer" [amersaf85.*.yahoo.com]
> Hi all
> I want to do geometry optimization of a system, what is the best molecule
> specification format, Z-Matrix, Cartesian coordinates, or Mixed to do that?
Safiya,
1) Which is best depends on many things: the quantum code, your experience,
your abilities as scientific programmer.
2) I remember you are using gaussian.
3) For the optimizers installed in gaussian using Z-matrix can be very
efficient.
4) If you enjoy programming you will love to read the postg code, that is
able to use gaussian as a routine to drive optimizations and other tasks.
5) Using symmetry and cartesian coordinates gives you all freedom, but
it is not simple.
6) Remember: there is a steep ladder to scientific programming, but
it pays at the end, ¡you become proficient in exploring math world!
7) In <http://en.wikipedia.org/wiki/Z-matrix_%28chemistry%29>
there are
good places to explore.
Best regards,
Dr. Víctor Luaña
--
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===(((==)))==================================+=========================
! Dr.Víctor Luaña, in silico chemist & prof. ! Mediocre is worse
than
! Departamento de Química Física y Analítica ! good, but it is
also
! Universidad de Oviedo, 33006-Oviedo, Spain ! worse than bad, because
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