CCL: calculation of mechanical stress on molecule
- From: "Artemi Bendandi"
<artemi.bendandi!=!gmail.com>
- Subject: CCL: calculation of mechanical stress on molecule
- Date: Tue, 14 Sep 2021 05:43:35 -0400
Sent to CCL by: "Artemi Bendandi" [artemi.bendandi!A!gmail.com]
Hi everyone!
I'm writing to ask for suggestions on software with which to calculate
mechanical stress on
atoms/residues on snapshots of an MD trajectory (.pdb files). I found CAMS and
mdStress but they don't
seem to be maintained/documented/used(?).
I was wondering if anyone had any suggestions. Bear in mind that we need
something that works on
nucleic acids as well as protein.
Thanks in advance!
Cheers,
Artemi Bendandi
Postdoctoral Fellow
PhD, Physics Computational Biophysicist
Istituto Italiano di Tecnologia (IIT)
Genoa, Italy