CCL: AlphaFold 3 vs AutoDock Vina

["Oleg Trott" <trott*caa.columbia.edu>]

 Sent to CCL by: "Oleg  Trott" [trott-$-caa.columbia.edu]
 Hello, everyone!
 DeepMind's new AlphaFold 3 attempts to predict protein-ligand binding, and
 their publication compares it to AutoDock Vina (which I built). But their
 methodology seems strange.
 I wrote up my comments in a blog post. If you have an interest in AI and/or
 docking, I hope you'll find it insightful.
 https://olegtrott.substack.com/p/are-alphafolds-new-results-a-miracle